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Institute for Machine Learning
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Publications 2013

Journals

HapFABIA: Identification of very short segments of identity by descent characterized by rare variants in large sequencing data Nucl. Acids Res. DEXUS: Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions Nucl. Acids Res. Increasing the discovery power of -omics studies CAMDA Testing noisy numerical data for monotonic association Inform. Sci.

Conferences

HapFABIA: Identification of very short segments of identity by descent (IBD) via biclustering ASHG
Author(s): Sepp Hochreiter, Gundula Povysil
Published: Talk at Annual Meeting of the American Society of Human Genetics (ASHG 2013), Boston, USA, October 22-26, 2013
Abstract: PDF, opens an external URL in a new window
Detecting Differentially Expressed Genes in RNA-Seq Data with Unknown Conditions ASHG
Author(s): Günter Klambauer, Thomas Unterthiner, Sepp Hochreiter
Published: Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2013), Boston, USA, October 22-26, 2013
Abstract: PDF, opens an external URL in a new window
PODKAT: a non-burden test for associating complex traits with rare and private variants ASHG
Author(s): Ulrich Bodenhofer, Sepp Hochreiter
Published: Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2013), Boston, USA, October 22-26, 2013
Abstract: PDF, opens an external URL in a new window
IBD Mapping of Autism Microarray Data ASHG
Author(s): Gundula Povysil, Sepp Hochreiter
Published: Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2013), Boston, USA, October 22-26, 2013
Abstract: PDF, opens an external URL in a new window

 

Publications (non-peer-reviewed)

Computational Methods Aiding Early-Stage Drug Design (Dagstuhl Seminar 13212) Dagstuhl Reports Detecting rare copy number variations (CNVs) with sparse coding ISMB
Author(s): Andreas Mitterecker, Djork-Arné Clevert, Andreas Mayr, Willem Talloen, Hinrich W.H. Göhlmann, Sepp Hochreiter
Published: Poster at 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Berlin, Germany, July 21 - July 23 2013
Protein target prediction with Logistic regression in a large scale setting ISMB
Author(s): Andreas Mayr, Andreas Mitterecker, Günter Klambauer, Martin Heusel, Aakash Chavan Ravindranath, Andreas Bender, Jörg K. Wegner, Sepp Hochreiter
Published: Poster at 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Berlin, Germany, July 21 - July 23 2013
Bicluster analysis in drug discovery ISMB
Author(s): Martin Heusel, Djork-Arné Clevert, Günter Klambauer, Andreas Mayr, Andreas Mitterecker, Ulrich Bodenhofer, Sepp Hochreiter
Published: Poster at 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Berlin, Germany, July 21 - July 23 2013
Platform specific performance characteristics in view of ERCC spike-ins ISMB
Author(s): Pawel P. Labaj, David Kreil, Nancy Stralis-Pavese, Djork-Arné Clevert, Mario Fasold, Hans Binder, Sepp Hochreiter
Published: Poster at 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Berlin, Germany, July 21 - July 23 2013

Theses

IBD Mapping of Autism Microarray Data - Beyond Linkage and Association Mapping Master Thesis
Author(s): Gundula Povysil
Published: Master Thesis, Jan 2013