Author(s): | Sarah A. Munro, Steven P. Lund, P. Scott Pine, Hans Binder, Djork-Arné Clevert, Ana Conesa, Joaquin Dopazo, Mario Fasold, Sepp Hochreiter, Huixiao Hong, Nedereh Jafari, David P. Kreil, Pawel P. Labaj, Sheng Li, Yang Liao, Simon M. Lin, Joseph Meehan, Christopher E. Mason, Javier Santoyo-Lopez, Robert A. Setterquist, Leming Shi, Wei Shi, Gordon K. Smyth, Nancy Stralis-Pavese, Zhenqiang Su, Weida Tong, Charles Wang, Jian Wang, Joshua Xu, Zhan Ye, Yong Yang, Ying Yu, Marc Salit |
Published: | Nature Communications 5, Article number: 5125, 25 September 2014 doi:10.1038/ncomms6125 |
Download: | Draft Version arXiv |
Zeitschriften
Assessing Technical Performance in Differential Gene Expression Experiments with External Spike-in RNA Control Ratio Mixtures Nature Communications 5
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Nature Biotechnology
Author(s): | SEQC/MAQC-III Consortium |
Published: | Nature Biotechnology, 32:903–914, 2014 doi:10.1038/nbt.2957 |
Download: | Full Text |
Furby: fuzzy force-directed bicluster visualization BMC Bioinformatics
Author(s): | Marc Streit, Samuel Gratzl, Michael Gillhofer, Andreas Mayr, Andreas Mitterecker, Sepp Hochreiter |
Published: | BMC Bioinformatics, 15(Suppl 6):S4, 2014 doi:10.1186/1471-2105-15-S6-S4 |
Download: | Abstract Full Text |
Lck Mediates Signal Transmission from CD59 to the 1 TCR/CD3 Pathway in Jurkat T Cells PLoS ONE
Author(s): | Anna-M. Lipp, Kata Juhasz, Christian Paar, Christoph Ogris, Paul Eckerstorfer, Roland Thuenauer, Jan Hesse, Benedikt Nimmervoll, Hannes Stockinger, Gerhard J. Schütz, Ulrich Bodenhofer, Zsolt Balogi, Alois Sonnleitner |
Published: | PLoS ONE, 9(1):e85934, 2014 doi:10.1371/journal.pone.0085934 |
Abstract: |
Konferenzen
Multi-Task Deep Networks for Drug Target Prediction NIPS
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Marvin Steijaert, Hugo Ceulemans, Jörg Wegner, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Transfer and Multi-task Learning, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Deep Learning for Drug Target Prediction NIPS
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Marvin Steijaert, Hugo Ceulemans, Jörg Wegner, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Representation and Learning Methods for Complex Outputs, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Aiding Drug Design with Deep Neural Networks NIPS
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Marvin Steijaert, Jörg Wegner, Hugo Ceulemans, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Machine Learning in Computational Biology, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Deep Learning as an Opportunity in Virtual Screening NIPS
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Marvin Steijaert, Jörg Wegner, Hugo Ceulemans, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Machine Learning for Clinical Data Analysis, Healthcare and Genomics, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Rectified Factor Networks and Dropout NIPS
Author(s): | Djork-Arné Clevert, Thomas Unterthiner, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Deep Learning and Representation Learning, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Deep Learning as an Opportunity in Virtual Screening NIPS
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Marvin Steijaert, Jörg Wegner, Hugo Ceulemans, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2014), Workshop on Deep Learning and Representation Learning, Montreal, Canada, December 8-13, 2014 |
Downdload: |
Utilizing Private Variants in Large Genome-Wide Association Studies: Issues, Techniques, Experiences ASHG
Author(s): | Ulrich Bodenhofer, Sepp Hochreiter |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2014), San Diego, USA, October 18-22, 2014 |
Abstract: |
Detection of Copy Number Variations in Cancer Genomes from High Throughput Sequencing Data ASHG
Author(s): | Günter Klambauer, Sepp Hochreiter |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2014), San Diego, USA, October 18-22, 2014 |
Abstract: |
Population specific patterns of novel haplotype groups at the PAH locus ASHG
Author(s): | Gundula Povysil, Stefanie Wieser, Sepp Hochreiter, Johannes Zschocke |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2014), San Diego, USA, October 18-22, 2014 |
Abstract: |
Identity by descent between humans, Denisovans, and Neandertals ASHG
Author(s): | Sepp Hochreiter, Gundula Povysil |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2014), San Diego, USA, October 18-22, 2014 |
Abstract: |
A Cloud-based GWAS Analysis Pipeline for Clinical Researchers CLOSER
Author(s): | Paul Heinzlreiter, James Richard Perkins, Oscar Torreno, Johan Karlsson, Juan Antonio Ranea, Andreas Mitterecker, Miguel Blanca, Oswaldo Trelles |
Published: | Proc. of the 4th International Conference on Cloud Computing and Services Science (CLOSER 2014), ISBN 978-989-758-019-2, Barcelona, Spain, pp. 387-394, April 2014, doi:10.5220/0004802103870394 |
Publikationen (non-peer-reviewed)
FABIA: A Probabilistic Model for Biclustering and its Application to Analyzing Big Data in Drug Design ISMB
Author(s): | Djork-Arné Clevert, Günter Klambauer, Andreas Mayr, Andreas Mitterecker, Sepp Hochreiter |
Published: | Poster at 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, USA, July 11 - July 15 2014 |
Detecting biomarkers on label-free mass spectrometry data using biclustering ISMB
Author(s): | Andreas Mitterecker, Djork-Arné Clevert, Sepp Hochreiter |
Published: | Poster at 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, USA, July 11 - July 15 2014 |
Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions ISMB
Author(s): | Thomas Unterthiner, Günter Klambauer, Sepp Hochreiter |
Published: | Poster at 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, USA, July 11 - July 15 2014 |
DeepSAR: Drug Target Prediction using Deep Learning ISMB
Author(s): | Andreas Mayr, Alexander Pfaffinger, Thomas Unterthiner, Günter Klambauer, Marvin Steijaert, Jörg K. Wegner, Hugo Ceulemans, Sepp Hochreiter |
Published: | Poster at 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, USA, July 11 - July 15 2014 |
Sharing of Very Short IBD Segments between Humans, Neandertals, and Denisovans bioRxiv
Author(s): | Gundula Povysil, Sepp Hochreiter |
Published: | bioRxiv, online April 7, 2014, doi:10.1101/003988 |
Abschlussarbeiten
Machine Learning Techniques for the Analysis of High-Throughput DNA and RNA Sequencing Data
Author(s): | Günter Klambauer |
Published: | PhD Thesis, 2014 |