Assessing Technical Performance in Differential Gene Expression Experiments with External Spike-in RNA Control Ratio Mixtures _{Nature Communications 5}

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium _{Nature Biotechnology}

Furby: fuzzy force-directed bicluster visualization _{BMC Bioinformatics}

Lck Mediates Signal Transmission from CD59 to the 1 TCR/CD3 Pathway in Jurkat T Cells _{PLoS ONE}

Multi-Task Deep Networks for Drug Target Prediction _NIPS

Deep Learning for Drug Target Prediction _NIPS

Aiding Drug Design with Deep Neural Networks _NIPS

Deep Learning as an Opportunity in Virtual Screening _NIPS

Rectified Factor Networks and Dropout _NIPS

Deep Learning as an Opportunity in Virtual Screening _NIPS

Utilizing Private Variants in Large Genome-Wide Association Studies: Issues, Techniques, Experiences _ASHG 

Detection of Copy Number Variations in Cancer Genomes from High Throughput Sequencing Data _ASHG

Population specific patterns of novel haplotype groups at the PAH locus _ASHG

Identity by descent between humans, Denisovans, and Neandertals _ASHG

A Cloud-based GWAS Analysis Pipeline for Clinical Researchers _CLOSER

FABIA: A Probabilistic Model for Biclustering and its Application to Analyzing Big Data in Drug Design _ISMB

Detecting biomarkers on label-free mass spectrometry data using biclustering _ISMB

Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions _ISMB

DeepSAR: Drug Target Prediction using Deep Learning _ISMB

Sharing of Very Short IBD Segments between Humans, Neandertals, and Denisovans _bioRxiv

Machine Learning Techniques for the Analysis of High-Throughput DNA and RNA Sequencing Data