- Deep Learning for In-Silico Toxicogenetics Testing (DeepToxGen) (2017-2020)
- Deep Learning in Pharmacology (2017-2019)
Bayer AG, Berlin
- TTUR - Two time-scale update rule for training GANs (2017-2018)
- LSTM4Drive - Long Short-Term Memory For Self-Driving Cars (2017-2018)
LIT-2016-1-SEE-017
- Einsatz von Long Short Term Memory (LSTM) für self-driving automotion (2016-2019)
Audi Electronics Venture GmbH
- Exaptation - Machine Learning for Compound Activity Prediction (2016-2018)
JANSSEN RESEARCH & DEVELOPMENT, a division of JANSSEN PHARMACEUTICA N.V.
- Deep Learning Models for prediction of hERG inhibitors and kinase inhibitors (2016-2018)
Merck KGaG, Darmstadt, Germany
- Deep Learning for vision and language applied to fashion tasks (2016-2019)
Zalando SE, Berlin, Germany
- Improving Deep Learning Models in Drug Discovery (2016-2019)
Merck KGaG, Darmstadt, Germany
- LSTM for Uniform Credit Assignment to Deep Networks (2016-2019)
FWF Project Number P 28660-N31
- Evaluierung von Verfahren für Semantische und Objektsegmentierung zur Bilderkennung im automotiven Kontext (2016)
Audi Electronics Venture GmbH
- ExCAPE (2015-2018)
H2020-FETHPC-2014
- DeepTox: A computational pipeline for predicting toxic effects of chemical compounds
Challenge-winning research on machine learning methods, such as deep learning, for prediction of toxicity based on chemical structure.
- IBD Sharing between Africans, Neandertals, and Denisovans
Research for the paper "IBD Sharing between Africans, Neandertals, and Denisovans".
- ChemBioBridge - Bridging chemistry and biology for pharma industry through kernel-based large-scale data fusion (2014-2016)
JANSSEN RESEARCH & DEVELOPMENT, a division of JANSSEN PHARMACEUTICA N.V.
- Very Short IBD Sharing between Humans, Neandertals (Neanderthals), and Denisovans
Research investigating the sharing of very short identity by descent (IBD) segments between humans, Neandertals (Neanderthals), and Denisovans.
- Short segments of identity by descent (IBD)
Two haplotypes are identical by descent (IBD) if they share a segment that both inherited from a common ancestor. Current IBD methods reliably detect long IBD segments. We investigate SHORT IBD segments using FABIA biclustering.
- Mr.SymBioMath (2013-2017)
FP7-PEOPLE-2012-IAPP, 7th Framework Programme
- QSTAR - Gene expression assisted compound chemistry (2011-2013)
Johnson & Johnson Pharmaceutical Research & Development, a division of Janssen Pharmaceutica N.V.
- Copy number analysis of German outbreak strain E. Coli EHEC O104:H4 (TY-2482, LB226692) by comparing it to strain K12 DH10B at Ion Torrent sequencing data
- Development of detection and feature selection methods for small copy number variations in non-oncology studies (2009-2010)
Merck Serono S.A. - Geneva
- Cell line based compound prioritization and response prediction (2009-2010)
Johnson & Johnson Pharmaceutical Research & Development, a division of Janssen Pharmaceutica N.V.
- Development of analysis and summarization techniques for Affymetrix arrays at probe level (2006-2008)
Johnson & Johnson Pharmaceutical Research & Development, a division of Janssen Pharmaceutica N.V.
- Sequential and structural analysis of avian influenza A virus genome (2006-2009)
Supported by the city of Linz