Author(s): | Ulrich Bodenhofer, Enrico Bonatesta, Christoph Kainrath, Sepp Hochreiter |
Published: | Bioinformatics, 31(24):3997-3999, 2015 doi:10.1093/bioinformatics/btv494 |
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msa: an R package for multiple sequence alignment Bioinformatics
Author(s): | Ulrich Bodenhofer, Enrico Bonatesta, Christoph Kainrath, Sepp Hochreiter |
Published: | Bioinformatics, 31(24):3997-3999, 2015 doi:10.1093/bioinformatics/btv494 |
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Prediction of human population responses to toxic compounds by a collaborative competition Nature Biotechnology
Author(s): | Federica Eduati, Lara M Mangravite, Tao Wang, Hao Tang, ... , Sepp Hochreiter, Günter Klambauer, Andreas Mayr, ... , Ivan Rusyn, Fred A Wright, Gustavo Stolovitzky, Yang Xie, Julio Saez-Rodriguez |
Published: | Nature Biotechnology, 33(9):933-940, 2015 doi:10.1038/nbt.3299 |
Rchemcpp: a web service for structural analoging in ChEMBL, Drugbank and the Connectivity Map Bioinformatics
Author(s): | Günter Klambauer, Martin Wischenbart, Michael Mahr, Thomas Unterthiner, Andreas Mayr, Sepp Hochreiter |
Published: | Bioinformatics, 31(20):3392-3394, 2015 doi:10.1093/bioinformatics/btv373 |
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KeBABS: an R package for kernel-based analysis of biological sequences Bioinformatics
Author(s): | Johannes Palme, Sepp Hochreiter, Ulrich Bodenhofer |
Published: | Bioinformatics, 31(15):2574-2576, 2015 doi:10.1093/bioinformatics/btv176 |
Download: | |
Abstract: | Abstract |
Using transcriptomics to guide lead optimization in drug discovery projects Drug Discovery Today
Author(s): | Bie Verbist, Günter Klambauer, Liesbet Vervoort, Willem Talloen, QSTAR Consortium, Ziv Shkedy, Olivier Thas, Andreas Bender, Hinrich W.H. Göhlmann, Sepp Hochreiter |
Published: | Drug Discovery Today, 20(5):505-513, 2015 doi:10.1016/j.drudis.2014.12.014 |
Connecting gene expression data from connectivity map and in silico target predictions for small molecule mechanism-of-action analysis Mol. BioSyst.
Author(s): | Aakash Chavan Ravindranath, Nolen Perualila-Tan, Adetayo Kasim, Georgios Drakakis, Sonia Liggi, Suzanne C. Brewerton, Daniel Mason, Michael J. Bodkin, David A. Evans, Aditya Bhagwat, Willem Talloen, Hinrich W. H. Göhlmann, QSTAR Consortium, Ziv Shkedy, Andreas Bender |
Published: | Mol. BioSyst., 11:86-96, 2015 doi:10.1039/C4MB00328D |
Download: | Abstract |
Graded dominance and related graded properties of fuzzy connectives Fuzzy Sets and Systems
Author(s): | Libor Behounek, Ulrich Bodenhofer, Petr Cintula, Susanne Saminger-Platz, Peter Sarkoci |
Published: | Fuzzy Sets and Systems, 262:78-101, 2015 doi:10.1016/j.fss.2014.04.025 |
ELU-Networks - Fast and Accurate CNN Learning on ImageNet ICCV
Author(s): | Martin Heusel, Djork-Arné Clevert, Günter Klambauer, Andreas Mayr, Karin Schwarzbauer, Thomas Unterthiner, Sepp Hochreiter |
Published: | Poster at International Conference on Computer Vision (ICCV 2015), Santiago, Chile, December 13-16, 2015 |
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Rectified Factor Networks NIPS
Author(s): | Djork-Arné Clevert, Andreas Mayr, Thomas Unterthiner, Sepp Hochreiter |
Published: | Conference Neural Information Processing Systems Foundation (NIPS 2015), Montreal, Canada, December 7-12, 2015 |
Downdload: | PDF, Supplement (PDF) |
panelcn. MOPS reaches clinical standards as a CNV detection tool for targeted panel sequencing data ASHG
Author(s): | Verena Haunschmid, Gundula Povysil, Julia Vogt, Katharina Wimmer, Günter Klambauer, Sepp Hochreiter |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2015), Baltimore, USA, October 6-10, 2015 |
Abstract: |
KeBABS: an R/Bioconductor package for kernel-based analysis of biological sequences ASHG
Author(s): | Johannes Palme, Sepp Hochreiter, Ulrich Bodenhofer |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2015), Baltimore, USA, October 6-10, 2015 |
Abstract: |
PODKAT: a software package implementing the position-dependent kernel association test ASHG
Author(s): | Ulrich Bodenhofer, Sepp Hochreiter |
Published: | Poster at Annual Meeting of the American Society of Human Genetics (ASHG 2015), Baltimore, USA, October 6-10, 2015 |
Abstract: |
Early Interbreeding between Ancestors of Humans, Neandertals, and Denisovans within Africa SMBE
Author(s): | Gundula Povysil, Sepp Hochreiter |
Published: | Poster at Annual Meeting of the Society for Molecular Biology and Evolution (SMBE 2015), Vienna, Austria, July 12-16, 2015 |
Abstract: |
Toxicity Prediction using Deep Learning arXiv.org
Author(s): | Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Sepp Hochreiter |
Published: | arXiv.org, Mar 2015 |
Download: | arXiv:1503.01445 [stat.ML] |
Rectified Factor Networks arXiv.org
Author(s): | Djork-Arné Clevert, Thomas Unterthiner, Andreas Mayr, Hubert Ramsauer, Sepp Hochreiter |
Published: | arXiv.org, Feb 2015 |
Download: | arXiv:1502.06464 [cs.LG] |
Support Vector Regression vs. Neural Network Regression in the Field of Predicting Drug-Target Binding Activities Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Alexander Pfaffinger |
Similarity-based clustering of big data: A parallel ensemble variant of leveraged affinity propagation Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Chrats Melkonian |
Development, application and analysis of a pipeline for genotype-to-phenotype whole-genome based predictions Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Roman Josef Rainer |
A copy number analysis and genome-wide association study of schizophrenia data Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Nadine Stein |
KeBABS - An R Package for Kernel-Based Analysis of Biological Sequences Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Johannes Palme |
Inferring Regulatory Interactions from Microarray Data Using the FABIA Biclustering Method: A Case Study for E.coli K-12 Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Wilhelm Lichtberger |
Detecting CNVs in the 1000 Genomes Project Data Using cn.MOPS and Relating the Results to Transcriptome Sequencing Data Master Thesis
Published: | Master Thesis, 2015 |
Author(s): | Anna Maria Langmüller |